High quality bisulfite sequencing using nanogram amounts of genomic DNA

Abstract


Jihua Sun1 Honglong Wu Guanyu Ji Boxin Wu Shujing Yan Wen Gao Rena Lam Wenwei Zhang Xiuqing Zhang

Multiple methods have been developed to decipher the genome-scale DNA methylation (Methylome). Bisulfite sequencing (BS-seq), which combines sodium bisulfite conversion with high throughput sequencing, can measure DNA methylation at single-nucleotide resolutions. However, it normally needs large amounts of genomic DNA (5-10μg) to start with, thus creating an obstacle for it to be widely used. Here we optimized the normal BS-seq method for generating high quality bisulfite sequencing on whole genomes using nanogram DNA (MBS-seq). Systematic comparison the whole genome methylation study based on minute amount of genomic DNA through next generation sequencing technology.

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